Overview Annotation GWAS Evidence Associated genes

P33250

Metabolite ID
P33250
Deionized mass
470.3311 Da
Average m/z
471.3387
Average RT
16.9636
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.553e-16
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.78e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.042e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.604e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)6.29e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.234e-12
Glyma.05G103700 hypothetical protein NA 1Chr05:27632520–27637991 (+)6.833e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.199e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.395e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.402e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.746e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.864e-13
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)9.643e-13
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.483e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)5.832e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.647e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)5.832e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)5.832e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.648e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.519e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.934e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.441e-11
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)1.41e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)5.909e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)5.909e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)8.142e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)7.133e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.031e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)4.645e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)4.645e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)4.645e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)4.645e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.918e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.973e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.973e-12
Glyma.13G138300 hypothetical protein AT2G37130:AT2G37130:Peroxidase superfamily protein 1Chr13:25095882–25099473 (-)4.701e-11
Glyma.13G149800 hypothetical protein AT2G36580:AT2G36580:Pyruvate kinase family protein 1Chr13:26329040–26335075 (-)4.921e-13
Glyma.13G238400 hypothetical protein AT3G46930:AT3G46930:Protein kinase superfamily protein__AT5G58950:AT5G58950:Protein kinase superfamily protein 1Chr13:34872388–34881743 (-)8.639e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.616e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.406e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.78e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.455e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)5.997e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)5.985e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)5.985e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.763e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.017e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.6e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)6.82e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.92e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.002e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)5.99e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)6.116e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.355e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.355e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)1.557e-11