Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32894

Metabolite ID
P32894
Deionized mass
436.1215 Da
Average m/z
437.1271
Average RT
16.8357
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)7.537e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)5.252e-16
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)2.133e-11
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)3.583e-15
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)2.875e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.141e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.141e-12
Glyma.02G116900 hypothetical protein NA 1Chr02:11394318–11395331 (-)1.807e-11
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 1Chr03:36109689–36112241 (+)7.165e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.342e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.68e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.211e-14
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)6.9e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)6.9e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)7.436e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)7.006e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)8.872e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)8.872e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)3.756e-14
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)1.291e-12
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)1.291e-12
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)1.291e-12
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)3.195e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.252e-16
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.759e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.853e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.853e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.852e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.256e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.537e-12
Glyma.15G232600 hypothetical protein NA 1Chr15:43719004–43723574 (+)9.417e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.871e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.646e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.852e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)4.196e-13
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)9.034e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)9.034e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.492e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.904e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.83e-12
Glyma.16G219700 hypothetical protein NA 1Chr16:37690133–37695529 (-)1.024e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.49e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.704e-11