Overview Annotation GWAS Evidence Associated genes

P32828

Metabolite ID
P32828
Deionized mass
707.2800 Da
Average m/z
708.2866
Average RT
16.8161
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.539e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.539e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)3.239e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.366e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.366e-12
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)1.129e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)1.129e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)1.129e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.244e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)7.806e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)4.074e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)5.42e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)1.192e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.325e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.325e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.325e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.111e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.111e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.616e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.175e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.456e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.456e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.226e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.226e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.539e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.38e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.529e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.043e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.529e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.529e-14
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.525e-12
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)1.21e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.602e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.614e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.335e-11
Glyma.16G138400 hypothetical protein NA 1Chr16:29560913–29562163 (+)4.749e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)5.667e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)1.343e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.038e-13
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.039e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.018e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.381e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.524e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.226e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.226e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.077e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.552e-11