Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32795

Metabolite ID
P32795
Deionized mass
644.2955 Da
Average m/z
645.3008
Average RT
16.8034
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)2.931e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.373e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.968e-15
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.687e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)2.462e-17
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.103e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.449e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)7.13e-11
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)2.57e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)2.57e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.39e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)8.708e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.895e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.929e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.616e-11
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)6.497e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)3.025e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)1.266e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)5.449e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.116e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.825e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.825e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.825e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.825e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)2.245e-11
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)8.966e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.174e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.173e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.122e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.122e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.165e-13
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.544e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.687e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)1.624e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)4.447e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)9.35e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)9.527e-12
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)4.902e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.166e-12
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)5.157e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.166e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.462e-17
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)7.231e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.103e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)9.703e-11
Glyma.18G259000 hypothetical protein NA 1Chr18:54442402–54446789 (-)1.251e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.003e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)5.545e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)5.793e-11