Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32752

Metabolite ID
P32752
Deionized mass
380.1103 Da
Average m/z
381.1168
Average RT
16.7880
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
77
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

77 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)1.529e-12
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)4.306e-12
Glyma.03G246500 hypothetical protein AT5G49570:PNG1:peptide-N-glycanase 1 2Chr03:44341465–44350438 (-)6.751e-11
Glyma.06G090100 hypothetical protein NA 2Chr06:6985471–6996418 (+)8.811e-19
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.001e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.001e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.509e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.914e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.914e-12
Glyma.01G218800 hypothetical protein AT1G63430:AT1G63430:Leucine-rich repeat protein kinase family protein 1Chr01:54860809–54866642 (+)9.152e-11
Glyma.01G219700 hypothetical protein AT3G52905:AT3G52905:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 1Chr01:54908697–54911774 (-)9.152e-11
Glyma.01G220100 hypothetical protein NA 1Chr01:54947015–54948375 (+)9.152e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.746e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.216e-11
Glyma.03G246600 hypothetical protein NA 1Chr03:44355048–44357092 (+)6.751e-11
Glyma.05G217100 hypothetical protein AT1G64440:RHD1:NAD(P)-binding Rossmann-fold superfamily protein 1Chr05:39735139–39739763 (+)2.341e-13
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)3.979e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)6.087e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.254e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.556e-13
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)9.059e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.838e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)1.877e-11
Glyma.06G090200 hypothetical protein NA 1Chr06:6994887–6999658 (-)8.811e-19
Glyma.06G090300 hypothetical protein AT1G09980:AT1G09980:Putative serine esterase family protein__AT1G58350:ZW18:Putative serine esterase family protein 1Chr06:7005790–7019054 (+)8.811e-19
Glyma.06G090400 hypothetical protein AT5G49650:XK-2:xylulose kinase-2 1Chr06:7022045–7025738 (+)8.811e-19
Glyma.06G091500 hypothetical protein NA 1Chr06:7175769–7178554 (-)4.27e-15
Glyma.06G093300 hypothetical protein NA 1Chr06:7344696–7351172 (+)8.302e-12
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.792e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.792e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.684e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)3.391e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)7.294e-12
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)8.846e-11
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)1.42e-11
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)7.333e-11
Glyma.11G089300 hypothetical protein AT1G14120:AT1G14120:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr11:6759141–6761139 (-)4.329e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)4.273e-14
Glyma.11G095600 hypothetical protein AT1G50460:HKL1:hexokinase-like 1 1Chr11:7249880–7254364 (-)1.737e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.719e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.719e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.522e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.522e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.785e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.785e-11
Glyma.13G050500 hypothetical protein NA 1Chr13:14674243–14683099 (-)5.562e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.001e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.001e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.393e-11
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)1.32e-14
Glyma.13G238000 hypothetical protein AT1G28260:AT1G28260:Telomerase activating protein Est1 1Chr13:34821490–34827651 (-)5.366e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)7.133e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.391e-12
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)9.169e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)2.841e-13
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)2.841e-13
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)1.831e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.707e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.64e-13
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)4.54e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.653e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)7.207e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.427e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.165e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.2e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.519e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)6.072e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.238e-12
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)3.385e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.564e-15
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.564e-15
Glyma.18G246100 hypothetical protein NA 1Chr18:53367993–53369121 (-)8.426e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.335e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.195e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.195e-11
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)4.476e-11
Glyma.20G018900 hypothetical protein NA 1Chr20:1960201–1961884 (+)1.633e-11