Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32040

Metabolite ID
P32040
Deionized mass
770.2116 Da
Average m/z
771.2188
Average RT
16.5287
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
60
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

60 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)4.201e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.913e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.833e-18
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.572e-12
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)1.309e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)2.497e-11
Glyma.03G136100 hypothetical protein NA 1Chr03:35199503–35203392 (-)4.64e-11
Glyma.03G206900 hypothetical protein AT3G58500:PP2A-4:protein phosphatase 2A-4 1Chr03:41442042–41447957 (+)8.869e-11
Glyma.03G207100 hypothetical protein AT5G06610:AT5G06610:lipase (DUF620) 1Chr03:41457109–41459671 (-)8.869e-11
Glyma.03G208600 hypothetical protein NA 1Chr03:41547831–41553312 (-)4.502e-12
Glyma.03G209200 hypothetical protein NA 1Chr03:41608160–41609266 (-)4.092e-12
Glyma.03G209300 hypothetical protein NA 1Chr03:41610860–41611045 (+)4.502e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.369e-11
Glyma.05G204100 hypothetical protein AT5G50670:SPL13B:Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein 1Chr05:38767835–38772912 (+)1.894e-12
Glyma.05G204600 hypothetical protein NA 1Chr05:38801528–38802396 (+)8.929e-13
Glyma.05G205200 hypothetical protein AT4G20330:AT4G20330:Transcription initiation factor TFIIE, beta subunit 1Chr05:38839164–38842104 (+)1.254e-12
Glyma.05G206200 hypothetical protein AT1G63410:AT1G63410:LURP-one-like protein (DUF567) 1Chr05:38904753–38908922 (-)3.535e-11
Glyma.05G206500 hypothetical protein NA 1Chr05:38926894–38929181 (-)4.106e-12
Glyma.05G206600 hypothetical protein AT4G11640:SR:serine racemase 1Chr05:38929677–38932471 (-)8.127e-12
Glyma.05G207100 hypothetical protein NA 1Chr05:38943141–38945550 (+)8.127e-12
Glyma.05G207500 hypothetical protein NA 1Chr05:38969844–38973417 (-)8.127e-12
Glyma.05G207900 hypothetical protein AT4G11450:AT4G11450:bromo-adjacent domain protein, putative (DUF3527) 1Chr05:39000306–39005331 (+)5.076e-15
Glyma.05G208000 hypothetical protein NA 1Chr05:39007106–39011525 (-)5.076e-15
Glyma.05G208100 hypothetical protein AT1G63640:AT1G63640:P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-co… 1Chr05:39013785–39022216 (-)5.076e-15
Glyma.05G217700 hypothetical protein NA 1Chr05:39770220–39774659 (-)5.375e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)5.123e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)8.549e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.217e-11
Glyma.06G142700 hypothetical protein AT5G05230:AT5G05230:RING/U-box superfamily protein__AT2G40640:AT2G40640:RING/U-box superfamily protein 1Chr06:11625469–11631123 (+)2.575e-12
Glyma.06G203300 hypothetical protein AT1G18640:PSP:3-phosphoserine phosphatase 1Chr06:19025714–19030363 (+)1.028e-11
Glyma.07G209600 hypothetical protein NA 1Chr07:38037644–38043272 (+)6.295e-12
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)3.502e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.725e-12
Glyma.08G225800 hypothetical protein AT1G78955:CAMS1:camelliol C synthase 1 1Chr08:18290918–18300538 (-)3.192e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.987e-11
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)7.158e-12
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)7.158e-12
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)8.282e-16
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)6.424e-14
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)6.424e-14
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)6.424e-14
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)5.054e-12
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)3.043e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.721e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.47e-11
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)2.827e-14
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.833e-18
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)1.912e-12
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 1Chr14:43740577–43742476 (-)1.632e-12
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)4.155e-11
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)4.155e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.572e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.134e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.541e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.541e-13
Glyma.17G112200 hypothetical protein AT5G52580:AT5G52580:RabGAP/TBC domain-containing protein 1Chr17:8837513–8848411 (+)1.953e-11
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)3.679e-12
Glyma.18G213500 hypothetical protein AT2G38550:AT2G38550:Transmembrane proteins 14C 1Chr18:50044567–50050213 (-)2.392e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)1.017e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)5.039e-12