Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32028

Metabolite ID
P32028
Deionized mass
462.2111 Da
Average m/z
463.2159
Average RT
16.5231
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)6.285e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.213e-11
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)4.019e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.198e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.029e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.031e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.261e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.213e-11
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)2.683e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)1.418e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.472e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.638e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)7.001e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.474e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.928e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.392e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.538e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.59e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.198e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.198e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.198e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.198e-13
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.958e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.484e-14
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.484e-14
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.209e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)7.826e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.833e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)6.72e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)7.344e-15
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)4.871e-14
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)4.871e-14
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)4.871e-14
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)4.871e-14
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)9.541e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)9.542e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)9.542e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.228e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.228e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)8.394e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.478e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.177e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.337e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.04e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.04e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.039e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.731e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.261e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)4.039e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.053e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.267e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)4.019e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.46e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.46e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.773e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.773e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.881e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.881e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)8.929e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.001e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.38e-16
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.196e-14
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.218e-15
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)4.53e-12