Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31842

Metabolite ID
P31842
Deionized mass
122.0369 Da
Average m/z
123.0449
Average RT
16.4572
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.019e-13
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 2Chr20:34184591–34191923 (+)1.247e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.13e-15
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.13e-15
Glyma.02G204500 hypothetical protein NA 1Chr02:38980978–38982630 (-)2.851e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)7.086e-21
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.676e-18
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)4.376e-13
Glyma.04G220400 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 1Chr04:49102263–49108229 (+)1.745e-11
Glyma.05G100500 hypothetical protein NA 1Chr05:26669951–26687648 (+)6.231e-11
Glyma.05G101700 NRAMP2A metal transporter Nramp2a AT2G23150:NRAMP3:natural resistance-associated macrophage protein 3 1Chr05:27055036–27059944 (+)6.681e-11
Glyma.05G101900 hypothetical protein AT3G50050:AT3G50050:Eukaryotic aspartyl protease family protein 1Chr05:27080056–27089688 (+)6.681e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)4.297e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)1.056e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.886e-16
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.445e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)3.743e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)1.971e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)1.38e-12
Glyma.09G019400 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 1Chr09:1518046–1520807 (+)6.967e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.341e-11
Glyma.10G032000 hypothetical protein AT3G54650:FBL17:RNI-like superfamily protein 1Chr10:2791868–2797166 (-)4.463e-11
Glyma.10G032200 hypothetical protein AT2G30570:PSBW:photosystem II reaction center W 1Chr10:2813469–2815415 (-)4.463e-11
Glyma.10G032400 hypothetical protein AT2G30575:LGT5:los glycosyltransferase 5 1Chr10:2816643–2821287 (-)4.143e-11
Glyma.10G032900 hypothetical protein NA 1Chr10:2870409–2873948 (+)9.303e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.594e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.077e-11
Glyma.11G228400 hypothetical protein AT2G40070:AT2G40070:flocculation FLO11-like protein 1Chr11:32375284–32381183 (-)4.432e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)6.313e-13
Glyma.12G190200 hypothetical protein AT5G22050:AT5G22050:Protein kinase superfamily protein 1Chr12:35173526–35176783 (-)8.483e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.548e-14
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)8.532e-13
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)8.532e-13
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.76e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)1.078e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)1.078e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)1.078e-11
Glyma.14G208600 hypothetical protein NA 1Chr14:47437358–47439597 (-)1.038e-11
Glyma.14G208700 hypothetical protein NA 1Chr14:47442866–47447625 (-)1.038e-11
Glyma.14G208900 hypothetical protein AT1G17200:AT1G17200:Uncharacterized protein family (UPF0497) 1Chr14:47451105–47454596 (-)1.038e-11
Glyma.14G209000 hypothetical protein NA 1Chr14:47461788–47463395 (+)1.038e-11
Glyma.14G209200 hypothetical protein NA 1Chr14:47466917–47468975 (+)1.038e-11
Glyma.14G209600 hypothetical protein NA 1Chr14:47485565–47488948 (-)1.038e-11
Glyma.16G051600 hypothetical protein AT5G41100:AT5G41100:hydroxyproline-rich glycoprotein family protein__AT3G26910:AT3G26910:hydroxyproline-rich glycoprote… 1Chr16:4963950–4972993 (-)1.783e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.311e-11
Glyma.16G173200 hypothetical protein NA 1Chr16:33378138–33378570 (-)4.687e-13
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)1.165e-11
Glyma.19G009600 hypothetical protein NA 1Chr19:902949–903967 (-)8.331e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.019e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)8.838e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.744e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.744e-12
Glyma.20G236700 hypothetical protein AT3G05545:AT3G05545:RING/U-box superfamily protein 1Chr20:46886326–46894385 (+)2.483e-11