Overview Annotation GWAS Evidence Associated genes

P31764

Metabolite ID
P31764
Deionized mass
266.1109 Da
Average m/z
533.2307
Average RT
16.4344
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G040400 hypothetical protein NA 1Chr03:5050463–5052307 (+)4.253e-11
Glyma.05G221700 hypothetical protein NA 1Chr05:40115849–40120124 (+)2.115e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.407e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)7.829e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.434e-11
Glyma.07G033200 hypothetical protein AT1G52770:AT1G52770:Phototropic-responsive NPH3 family protein 1Chr07:2603812–2606511 (+)5.194e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)6.77e-11
Glyma.13G053000 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 1Chr13:15046821–15050021 (+)2.671e-12