Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31747

Metabolite ID
P31747
Deionized mass
546.2982 Da
Average m/z
547.3056
Average RT
16.4285
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)3.672e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)7.999e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.726e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.726e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.144e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.509e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.508e-12
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)4.523e-12
Glyma.02G203100 hypothetical protein AT5G58000:AT5G58000:Reticulon family protein 1Chr02:38843090–38847217 (-)2.595e-13
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)3.427e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)3.672e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)8.555e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.66e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.66e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.66e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.594e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.594e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)7.342e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.472e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)6.472e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)5.703e-15
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.178e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.178e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.729e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.999e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.858e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.858e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.726e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.688e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.769e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.179e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.144e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)2.253e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.396e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.056e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.594e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.594e-12
Glyma.18G079100 hypothetical protein NA 1Chr18:7600652–7603424 (-)2.148e-13
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)9.854e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)4.845e-11
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 1Chr18:57755837–57757150 (-)7.321e-12
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 1Chr20:34757381–34771672 (+)8.872e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)1.603e-11