Overview Annotation GWAS Evidence Associated genes

P31578

Metabolite ID
P31578
Deionized mass
180.0401 Da
Average m/z
361.0897
Average RT
16.3849
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
88
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

88 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)2.263e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.621e-11
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)8.144e-14
Glyma.02G200700 hypothetical protein AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein 2Chr02:38435454–38459254 (-)8.591e-11
Glyma.02G202100 hypothetical protein AT3G52610:AT3G52610:GATA zinc finger protein 2Chr02:38707852–38719801 (+)3.59e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)2.798e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)6.139e-12
Glyma.11G061000 hypothetical protein AT4G37210:AT4G37210:Tetratricopeptide repeat (TPR)-like superfamily protein 2Chr11:4576441–4579697 (+)1.983e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.5e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)9.411e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)1.405e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.621e-11
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)7.673e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.898e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.898e-12
Glyma.02G192200 Purple acid phosphatase 16 AT3G10150:PAP16:purple acid phosphatase 16 1Chr02:36328821–36337010 (+)5.749e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)9.573e-15
Glyma.02G200600 hypothetical protein AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 1Chr02:38432334–38436063 (+)8.589e-11
Glyma.02G201100 hypothetical protein AT5G06200:CASP4:Uncharacterized protein family (UPF0497) 1Chr02:38497390–38499369 (-)8.592e-11
Glyma.02G201400 hypothetical protein AT5G06140:SNX1:sorting nexin 1 1Chr02:38539394–38547251 (+)8.591e-11
Glyma.02G204500 hypothetical protein NA 1Chr02:38980978–38982630 (-)1.197e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.937e-14
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.971e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.562e-16
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)1.935e-12
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)6.278e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)4.946e-11
Glyma.04G220400 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 1Chr04:49102263–49108229 (+)2.681e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.789e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.605e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)6.625e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)6.625e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)6.625e-13
Glyma.06G133700 Pyridoxal reductase, chloroplastic AT5G53580:PLR1:NAD(P)-linked oxidoreductase superfamily protein 1Chr06:10995438–10999422 (-)9.727e-12
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)4.352e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.051e-19
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.456e-13
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.129e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)9.156e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.148e-12
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)7.752e-11
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)2.412e-11
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)2.412e-11
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)2.412e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.775e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.126e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.078e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.077e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.077e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.077e-11
Glyma.11G126100 hypothetical protein AT1G08450:CRT3:calreticulin 3 1Chr11:9581659–9588340 (+)7.814e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.332e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.332e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.332e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.025e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.025e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.217e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.55e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.5e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)3.64e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.11e-14
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)7.164e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)6.234e-11
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)6.358e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)7.997e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.654e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.963e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.708e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.708e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)3.452e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.682e-12
Glyma.17G006300 hypothetical protein AT4G16380:AT4G16380:Heavy metal transport/detoxification superfamily protein 1Chr17:586135–588091 (+)3.108e-13
Glyma.17G007000 hypothetical protein NA 1Chr17:615525–616722 (+)3.108e-13
Glyma.17G007300 hypothetical protein AT4G16440:NAR1:ferredoxin hydrogenase 1Chr17:621626–627757 (-)3.108e-13
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)1.186e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)6.284e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.902e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.74e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.442e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.442e-14
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)2.956e-11
Glyma.19G127700 hypothetical protein AT5G12250:TUB6:beta-6 tubulin 1Chr19:38632803–38635633 (+)3.386e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)6.954e-16
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)4.885e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.331e-16
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.671e-15
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.209e-14
Glyma.20G019900 hypothetical protein NA 1Chr20:2058888–2064537 (+)9.265e-12