Overview Annotation GWAS Evidence Associated genes

P31412

Metabolite ID
P31412
Deionized mass
437.0582 Da
Average m/z
438.0661
Average RT
16.3326
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)4.403e-11
Glyma.03G035500 hypothetical protein NA 2Chr03:4289118–4294184 (+)2.799e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)4.1e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)8.426e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)8.668e-11
Glyma.03G034000 hypothetical protein NA 1Chr03:3971585–3975700 (-)7.755e-11
Glyma.03G034200 hypothetical protein NA 1Chr03:3989072–3993561 (+)2.775e-14
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)1.925e-12
Glyma.03G036500 WNK5 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr03:4402746–4408323 (+)2.948e-12
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)2.344e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)2.344e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)8.973e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)8.973e-12
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)8.677e-14
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)4.403e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)4.403e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)4.403e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)4.403e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.294e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.472e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.333e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.068e-12