Overview Annotation GWAS Evidence Associated genes

P31262

Metabolite ID
P31262
Deionized mass
253.1650 Da
Average m/z
254.1732
Average RT
16.2803
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
35
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

35 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 2Chr06:19693187–19711341 (-)1.356e-11
Glyma.06G207100 hypothetical protein AT1G73990:SPPA:signal peptide peptidase 2Chr06:19963095–19969940 (-)4.728e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.506e-12
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 2Chr09:6509441–6524102 (+)7.116e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.277e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.277e-12
Glyma.17G041200 hypothetical protein NA 2Chr17:3041792–3047638 (+)8.693e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.686e-11
Glyma.06G204600 hypothetical protein NA 1Chr06:19307068–19316071 (-)1.818e-11
Glyma.06G204800 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 1Chr06:19324767–19334540 (-)4.846e-11
Glyma.06G204900 hypothetical protein AT1G74120:AT1G74120:Mitochondrial transcription termination factor family protein 1Chr06:19353866–19354929 (+)4.847e-11
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 1Chr06:19583729–19590906 (+)1.356e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.82e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.047e-13
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.047e-13
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.171e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.22e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)4.545e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.286e-11
Glyma.09G066300 hypothetical protein AT2G19400:AT2G19400:AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 1Chr09:6487197–6498214 (-)1.021e-11
Glyma.09G067600 hypothetical protein NA 1Chr09:6804057–6804365 (+)7.218e-12
Glyma.09G070400 hypothetical protein NA 1Chr09:7185981–7189206 (+)2.704e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.823e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.231e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.231e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.954e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.954e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.277e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.68e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)2.116e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.498e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.899e-11
Glyma.17G041000 hypothetical protein AT3G06950:AT3G06950:Pseudouridine synthase family protein 1Chr17:3025531–3029224 (+)8.693e-13
Glyma.17G041300 hypothetical protein NA 1Chr17:3066546–3073337 (+)8.693e-13
Glyma.20G129900 hypothetical protein NA 1Chr20:37091399–37092697 (-)9.416e-11