Overview Annotation GWAS Evidence Associated genes

P31258

Metabolite ID
P31258
Deionized mass
458.0848 Da
Average m/z
459.0911
Average RT
16.2802
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.019e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)8.613e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.863e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.863e-11
Glyma.02G065200 hypothetical protein NA 1Chr02:5807044–5809742 (+)2.5e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.447e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.019e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.019e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.019e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.019e-12
Glyma.08G139100 hypothetical protein AT4G39710:PnsL4:FK506-binding protein 16-2 1Chr08:10641231–10643221 (+)9.216e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)2.656e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)8.306e-12
Glyma.11G065000 hypothetical protein AT4G36730:GBF1:G-box binding factor 1 1Chr11:4916855–4922192 (+)5.689e-12
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)8.978e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)7.677e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)7.677e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)8.613e-12
Glyma.14G208500 hypothetical protein NA 1Chr14:47412802–47421148 (-)1.083e-11
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)2.322e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.864e-14
Glyma.19G138700 hypothetical protein AT2G41740:VLN2:villin 2 1Chr19:40010487–40023584 (-)8.62e-11
Glyma.19G148100 hypothetical protein AT2G42070:NUDX23:nudix hydrolase homolog 23 1Chr19:40872657–40877411 (+)3.053e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.436e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)8.78e-12