Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31152

Metabolite ID
P31152
Deionized mass
268.1303 Da
Average m/z
269.1377
Average RT
16.2476
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.182e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.14e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)2.062e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.696e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)4.639e-12
Glyma.03G041500 hypothetical protein NA 1Chr03:5249601–5251509 (-)5.979e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)7.797e-11
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)7.227e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.407e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.845e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.845e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.119e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)9.489e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)9.489e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)9.489e-13
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)2.683e-11
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)1.388e-12
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)1.388e-12
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)1.388e-12
Glyma.06G285200 hypothetical protein AT2G31060:EMB2785:elongation factor family protein 1Chr06:47380397–47390651 (+)3.328e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.14e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.14e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.14e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.14e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)1.515e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.464e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)9.814e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)9.815e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.241e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.241e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.241e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.241e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)8.728e-12
Glyma.14G048200 hypothetical protein NA 1Chr14:3737773–3746209 (-)6.82e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.545e-14
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)9.549e-12
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)5.208e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)5.208e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)6.577e-11
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)1.798e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)4.73e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.645e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.029e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.029e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)9.601e-14