Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31065

Metabolite ID
P31065
Deionized mass
376.1514 Da
Average m/z
377.1566
Average RT
16.2190
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 4Chr03:4472672–4477787 (-)4.092e-11
Glyma.18G226300 hypothetical protein NA 4Chr18:51471540–51498344 (+)4.468e-11
Glyma.03G035500 hypothetical protein NA 2Chr03:4289118–4294184 (+)6.291e-12
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)5.741e-12
Glyma.18G231300 hypothetical protein AT3G61310:AT3G61310:AT hook motif DNA-binding family protein 2Chr18:51979095–51987062 (-)3.149e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.705e-11
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)3.025e-11
Glyma.03G035800 hypothetical protein NA 1Chr03:4317466–4321009 (+)1.12e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)5.633e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.58e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.882e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.636e-12
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)1.926e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)1.062e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.229e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.478e-11
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 1Chr08:8296196–8307328 (-)3.697e-11
Glyma.08G108400 hypothetical protein NA 1Chr08:8326311–8330206 (+)3.697e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)3.961e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)3.961e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)3.528e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.528e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)1.362e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)3.437e-13
Glyma.09G231600 hypothetical protein AT1G71692:AGL12:AGAMOUS-like 12 1Chr09:45485256–45489213 (+)2.41e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.366e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)5.742e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.198e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.27e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.466e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.27e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.27e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.715e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.302e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)3.492e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)3.724e-13
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)2.194e-12
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)5.008e-11
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 1Chr19:44599748–44609219 (-)1.015e-11