Overview Annotation GWAS Evidence Associated genes

P30910

Metabolite ID
P30910
Deionized mass
506.1401 Da
Average m/z
507.1483
Average RT
16.1672
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.074e-11
Glyma.05G100500 hypothetical protein NA 1Chr05:26669951–26687648 (+)7.04e-11
Glyma.05G101400 hypothetical protein NA 1Chr05:26897033–26897590 (+)1.947e-11
Glyma.05G101700 NRAMP2A metal transporter Nramp2a AT2G23150:NRAMP3:natural resistance-associated macrophage protein 3 1Chr05:27055036–27059944 (+)9.084e-12
Glyma.05G101900 hypothetical protein AT3G50050:AT3G50050:Eukaryotic aspartyl protease family protein 1Chr05:27080056–27089688 (+)9.084e-12
Glyma.05G102300 hypothetical protein AT3G50030:AT3G50030:ARM-repeat/Tetratricopeptide repeat (TPR)-like protein 1Chr05:27127163–27129666 (+)3.879e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)4.987e-14
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)9.635e-11
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)9.635e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.881e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.462e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.881e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.881e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.1e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)5.713e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.618e-12