Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30699

Metabolite ID
P30699
Deionized mass
323.1229 Da
Average m/z
324.1329
Average RT
16.1072
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.32e-15
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)8.456e-14
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)3.285e-11
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)5.582e-11
Glyma.01G211300 hypothetical protein AT4G12390:PME1:pectin methylesterase inhibitor 1 1Chr01:54280936–54282024 (-)3.111e-12
Glyma.01G212200 hypothetical protein AT1G12360:KEU:Sec1/munc18-like (SM) proteins superfamily 1Chr01:54370102–54380889 (+)1.942e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.06e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)9.041e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)1.834e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)1.834e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)4.003e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.534e-14
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)2.733e-12
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)2.733e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.356e-11
Glyma.09G209200 hypothetical protein AT1G32160:AT1G32160:beta-casein (DUF760) 1Chr09:43361634–43365478 (-)2.796e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)5.314e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.505e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)3.074e-13
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)5.925e-12
Glyma.16G189500 hypothetical protein NA 1Chr16:35202920–35206459 (-)4.938e-12
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)2.539e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.32e-15
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.846e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.846e-14