Overview Annotation GWAS Evidence Associated genes

P30617

Metabolite ID
P30617
Deionized mass
504.2576 Da
Average m/z
505.2651
Average RT
16.0861
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)9.152e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.842e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)5.639e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)1.089e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.089e-11
Glyma.08G188000 hypothetical protein AT1G22930:AT1G22930:T-complex protein 11 1Chr08:15072032–15079757 (-)3.1e-14
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)9.152e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.429e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.429e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.429e-12
Glyma.13G201300 hypothetical protein NA 1Chr13:31497499–31499001 (+)8.383e-11
Glyma.14G048200 hypothetical protein NA 1Chr14:3737773–3746209 (-)3.185e-11