Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30511

Metabolite ID
P30511
Deionized mass
1134.5534 Da
Average m/z
1135.5584
Average RT
16.0624
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.027e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)2.519e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.98e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.98e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.027e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.989e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.823e-21
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.444e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.617e-15
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.33e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.33e-12
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)7.961e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.516e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.729e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)9.977e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)2.182e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)4.047e-12
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)8.184e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.083e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.083e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.083e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.083e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)5.081e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)5.081e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)5.081e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.477e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.634e-11
Glyma.10G082200 hypothetical protein NA 1Chr10:9967027–9970045 (-)8.689e-11
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 1Chr11:25044939–25052549 (+)1.19e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.846e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.846e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.98e-11
Glyma.13G238400 hypothetical protein AT3G46930:AT3G46930:Protein kinase superfamily protein__AT5G58950:AT5G58950:Protein kinase superfamily protein 1Chr13:34872388–34881743 (-)5.628e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)3.951e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.652e-11
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 1Chr16:6914905–6920531 (+)3.159e-11
Glyma.16G157800 hypothetical protein NA 1Chr16:31832373–31834430 (-)2.717e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)9.595e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)2.519e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)9.889e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.682e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.682e-13
Glyma.20G099900 hypothetical protein AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) 1Chr20:34312783–34318966 (+)6.918e-12
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)2.284e-12
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)1.933e-12