Overview Annotation GWAS Evidence Associated genes

P30496

Metabolite ID
P30496
Deionized mass
309.0947 Da
Average m/z
310.1022
Average RT
16.0539
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)2.005e-12
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)1.973e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.96e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)6.599e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)3.193e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.255e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.255e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.255e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.255e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.834e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.18e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.241e-12
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 1Chr11:3634128–3639401 (-)5.537e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.225e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)7.905e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)7.905e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)7.905e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)7.905e-12
Glyma.11G058500 hypothetical protein AT4G37190:AT4G37190:plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein 1Chr11:4417029–4423791 (-)8.319e-13
Glyma.11G060700 hypothetical protein NA 1Chr11:4569714–4571506 (+)7.237e-11
Glyma.11G061000 hypothetical protein AT4G37210:AT4G37210:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:4576441–4579697 (+)1.866e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)8.767e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.126e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.03e-11