Overview Annotation GWAS Evidence Associated genes

P30465

Metabolite ID
P30465
Deionized mass
574.2249 Da
Average m/z
575.2326
Average RT
16.0452
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
34
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

34 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.329e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)4.169e-15
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 2Chr11:25044939–25052549 (+)1.448e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)6.727e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.329e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.362e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.16e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.16e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.16e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.798e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.899e-21
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.785e-18
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.035e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.035e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)9.417e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.319e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)6.54e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.388e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.388e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.388e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.388e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)9.123e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.619e-11
Glyma.11G020900 hypothetical protein NA 1Chr11:1482644–1490708 (+)2.816e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)4.25e-13
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)3.484e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.73e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)4.169e-15
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)5.433e-11
Glyma.17G144000 hypothetical protein AT4G16760:ACX1:acyl-CoA oxidase 1 1Chr17:11759547–11765498 (-)2.664e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)8.515e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)1.705e-13
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)8.515e-12
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)7.217e-11