P30331
Metabolite ID
P30331
Deionized mass
487.2425 Da
Average m/z
488.2483
Average RT
16.0055
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
109
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
109 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 4 | Chr19:1134716–1143232 (+) | 2.415e-12 | |
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 7.029e-13 | |
| Glyma.06G313500 | hypothetical protein | NA | 3 | Chr06:50191600–50203098 (-) | 1.353e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 3 | Chr16:36856833–36863994 (-) | 1.606e-12 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 3 | Chr20:34984922–34988496 (+) | 5.759e-13 | |
| Glyma.01G166400 | hypothetical protein | AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase | 2 | Chr01:50404781–50436297 (-) | 9.77e-12 | |
| Glyma.09G053800 | hypothetical protein | NA | 2 | Chr09:4737413–4755632 (-) | 1.772e-11 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 7.145e-11 | |
| Glyma.13G224800 | hypothetical protein | NA | 2 | Chr13:33748627–33756494 (-) | 2.832e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 2.858e-13 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 1.667e-12 | |
| Glyma.16G031600 | hypothetical protein | NA | 2 | Chr16:2964569–2985013 (+) | 8.226e-14 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1123637–1130946 (+) | 2.164e-12 | |
| Glyma.19G011900 | hypothetical protein | AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… | 2 | Chr19:1148510–1149495 (+) | 1.32e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 7.029e-13 | |
| Glyma.01G166300 | hypothetical protein | AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein | 1 | Chr01:50402188–50404181 (+) | 9.77e-12 | |
| Glyma.01G166600 | hypothetical protein | AT2G18000:TAF14:TBP-associated factor 14 | 1 | Chr01:50443699–50446896 (-) | 9.77e-12 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 1.859e-11 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 1.859e-11 | |
| Glyma.02G205400 | hypothetical protein | AT5G57880:MPS1:multipolar spindle 1 | 1 | Chr02:39040135–39043181 (-) | 1.121e-11 | |
| Glyma.02G265700 | hypothetical protein | NA | 1 | Chr02:45059017–45060529 (-) | 7.494e-12 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 7.675e-12 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 7.662e-15 | |
| Glyma.03G204300 | hypothetical protein | AT3G52370:FLA15:FASCICLIN-like arabinogalactan protein 15__AT2G35860:FLA16:FASCICLIN-like arabinogalactan protein 16 | 1 | Chr03:41250882–41253833 (-) | 3.421e-11 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 9.316e-11 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 4.446e-11 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 7.257e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 8.56e-12 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.98e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.98e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.98e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 6.359e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.432e-15 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.03e-16 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 2.409e-14 | |
| Glyma.06G078400 | hypothetical protein | AT4G31290:AT4G31290:ChaC-like family protein | 1 | Chr06:6068728–6071360 (+) | 2.332e-11 | |
| Glyma.06G079400 | hypothetical protein | NA | 1 | Chr06:6105463–6107101 (+) | 2.562e-12 | |
| Glyma.06G085900 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr06:6617102–6622706 (-) | 7.28e-14 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 2.426e-12 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 2.426e-12 | |
| Glyma.06G126500 | hypothetical protein | AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr06:10367536–10373426 (-) | 2.08e-11 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 5.659e-12 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 1.063e-11 | |
| Glyma.08G039600 | hypothetical protein | NA | 1 | Chr08:3107698–3116601 (-) | 7.081e-11 | |
| Glyma.08G122000 | hypothetical protein | AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr08:9397717–9410004 (+) | 2.763e-12 | |
| Glyma.08G139300 | hypothetical protein | AT2G22125:CSI1:binding protein | 1 | Chr08:10653279–10664544 (-) | 6.001e-11 | |
| Glyma.08G295700 | hypothetical protein | NA | 1 | Chr08:41062905–41071504 (-) | 6.109e-11 | |
| Glyma.08G330400 | hypothetical protein | NA | 1 | Chr08:44820327–44823668 (+) | 1.975e-11 | |
| Glyma.08G330500 | hypothetical protein | AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein | 1 | Chr08:44824324–44827127 (-) | 1.975e-11 | |
| Glyma.08G336900 | hypothetical protein | AT1G55730:CAX5:cation exchanger 5 | 1 | Chr08:45376142–45387404 (-) | 7.452e-11 | |
| Glyma.09G016500 | hypothetical protein | NA | 1 | Chr09:1274652–1276853 (-) | 4.932e-11 | |
| Glyma.09G052400 | hypothetical protein | AT1G31040:AT1G31040:PLATZ transcription factor family protein | 1 | Chr09:4583416–4589291 (-) | 2.466e-11 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 2.787e-13 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 5.156e-12 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 1.119e-13 | |
| Glyma.09G268900 | hypothetical protein | NA | 1 | Chr09:48638803–48644136 (+) | 6.563e-11 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 8.645e-11 | |
| Glyma.10G229600 | hypothetical protein | AT4G23630:BTI1:VIRB2-interacting protein 1 | 1 | Chr10:45968793–45973482 (-) | 4.069e-12 | |
| Glyma.10G233200 | hypothetical protein | NA | 1 | Chr10:46244187–46249491 (-) | 2.353e-11 | |
| Glyma.10G233700 | hypothetical protein | AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein | 1 | Chr10:46285252–46289700 (-) | 2.353e-11 | |
| Glyma.12G028800 | hypothetical protein | AT1G50300:TAF15:TBP-associated factor 15 | 1 | Chr12:2148313–2153234 (-) | 1.467e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 1.656e-12 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 1.656e-12 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.748e-12 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.748e-12 | |
| Glyma.12G198700 | hypothetical protein | AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein | 1 | Chr12:36001658–36004086 (+) | 1.931e-12 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 7.152e-11 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 1 | Chr12:36406747–36413696 (+) | 8.129e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 3.863e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 3.863e-12 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 8.142e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 7.145e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 5.22e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 5.22e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 5.219e-11 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 2.257e-12 | |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 6.326e-12 | |
| Glyma.13G184500 | hypothetical protein | NA | 1 | Chr13:29829471–29834027 (+) | 1.217e-11 | |
| Glyma.13G224500 | hypothetical protein | AT1G29750:RKF1:receptor-like kinase in flowers 1 | 1 | Chr13:33725180–33735368 (+) | 2.832e-11 | |
| Glyma.14G068100 | hypothetical protein | AT3G12550:FDM3:XH/XS domain-containing protein | 1 | Chr14:5701618–5711043 (-) | 9.423e-13 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 2.955e-14 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 1.392e-14 | |
| Glyma.14G071600 | hypothetical protein | AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein | 1 | Chr14:6016839–6019954 (+) | 1.832e-11 | |
| Glyma.14G071700 | hypothetical protein | AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 | 1 | Chr14:6037810–6041899 (+) | 1.929e-11 | |
| Glyma.14G071800 | hypothetical protein | NA | 1 | Chr14:6040746–6041899 (-) | 1.929e-11 | |
| Glyma.14G133600 | hypothetical protein | AT4G31390:ACDO1:Protein kinase superfamily protein | 1 | Chr14:23182134–23193763 (+) | 8.065e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 1.667e-12 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.659e-12 | |
| Glyma.16G032000 | hypothetical protein | AT4G01270:AT4G01270:RING/U-box superfamily protein | 1 | Chr16:3031286–3036010 (+) | 6.157e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 5.588e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 6.11e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 3.847e-11 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 8.149e-11 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 2.311e-11 | |
| Glyma.17G257100 | hypothetical protein | AT1G75660:XRN3:5'-3' exoribonuclease 3 | 1 | Chr17:41113121–41125026 (+) | 2.467e-11 | |
| Glyma.17G258400 | hypothetical protein | AT1G30755:AT1G30755:elongation factor G, putative (DUF668) | 1 | Chr17:41248979–41254225 (+) | 3.6e-12 | |
| Glyma.17G258700 | hypothetical protein | AT4G24190:SHD:Chaperone protein htpG family protein | 1 | Chr17:41280124–41284980 (-) | 3.792e-12 | |
| Glyma.18G200500 | hypothetical protein | AT3G51860:CAX3:cation exchanger 3 | 1 | Chr18:48016361–48020799 (-) | 5.943e-13 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 2.158e-16 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 2.164e-12 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 2.096e-14 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 2.096e-14 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 1.691e-11 | |
| Glyma.20G098200 | hypothetical protein | AT1G56345:AT1G56345:Pseudouridine synthase family protein | 1 | Chr20:34140611–34141832 (+) | 5.624e-11 | |
| Glyma.20G098400 | hypothetical protein | AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b | 1 | Chr20:34151918–34155417 (+) | 2.351e-11 | |
| Glyma.20G106800 | hypothetical protein | AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein | 1 | Chr20:34935548–34940516 (-) | 9.549e-11 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 6.599e-13 | |
| Glyma.20G107500 | hypothetical protein | AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr20:35011922–35015196 (-) | 6.781e-12 | |
| Glyma.20G108900 | hypothetical protein | AT4G24175:AT4G24175:kinesin-like protein | 1 | Chr20:35119868–35122488 (+) | 1.449e-11 |