Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30306

Metabolite ID
P30306
Deionized mass
273.1709 Da
Average m/z
274.1782
Average RT
15.9991
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 4Chr07:6307073–6313498 (-)1.92e-13
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 3Chr19:5178930–5212367 (+)9.339e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)1.873e-13
Glyma.07G070300 hypothetical protein AT2G45910:AT2G45910:U-box domain-containing protein kinase family protein 2Chr07:6364435–6372387 (-)8.597e-12
Glyma.14G036800 hypothetical protein AT2G26780:AT2G26780:ARM repeat superfamily protein 2Chr14:2752036–2776640 (-)5.693e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.013e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)5.827e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.773e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)8.714e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.023e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)5.589e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.678e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)6.453e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)6.453e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)6.453e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)7.437e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)2.903e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)4.409e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)4.409e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)2.208e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)2.208e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)4.409e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)3.569e-13
Glyma.07G070200 hypothetical protein AT1G20930:CDKB2;2:cyclin-dependent kinase B2;2 1Chr07:6362067–6364280 (+)3.43e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.53e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.53e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.573e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.573e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.573e-11
Glyma.14G036700 hypothetical protein NA 1Chr14:2747392–2751118 (-)8.832e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.855e-15
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)8.382e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.776e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.014e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.776e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.776e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.282e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.423e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.111e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.477e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.477e-11
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 1Chr19:5224298–5228610 (-)9.339e-12
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 1Chr19:5321094–5324327 (+)9.339e-12
Glyma.19G038300 hypothetical protein NA 1Chr19:5381177–5383149 (+)9.339e-12
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 1Chr19:5386122–5388865 (+)9.339e-12