Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30291

Metabolite ID
P30291
Deionized mass
273.1007 Da
Average m/z
274.1075
Average RT
15.9964
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)8.749e-13
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)2.429e-12
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)2.659e-13
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)2.961e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.954e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.954e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.365e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)8.749e-13
Glyma.01G154500 hypothetical protein AT1G31780:AT1G31780:oligomeric golgi complex subunit 1Chr01:49196540–49201707 (+)2.279e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.58e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.58e-11
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)4.668e-12
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 1Chr02:12849745–12869066 (+)2.377e-11
Glyma.02G129200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 1Chr02:13217893–13226292 (+)2.32e-11
Glyma.02G130200 hypothetical protein AT1G68740:PHO1;H1:EXS (ERD1/XPR1/SYG1) family protein 1Chr02:13340016–13346701 (-)2.32e-11
Glyma.02G130700 hypothetical protein AT1G68750:PPC4:phosphoenolpyruvate carboxylase 4 1Chr02:13470428–13489647 (-)2.32e-11
Glyma.02G131600 hypothetical protein AT4G34020:DJ1C:Class I glutamine amidotransferase-like superfamily protein 1Chr02:13577916–13581914 (+)2.32e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.064e-13
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)4.916e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.306e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.835e-15
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.985e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)6.203e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.038e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.537e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.537e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.537e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)7.333e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)7.333e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.954e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.954e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)5.438e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.954e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.966e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)4.571e-12
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)1.431e-11
Glyma.11G019200 hypothetical protein AT4G23730:AT4G23730:Galactose mutarotase-like superfamily protein 1Chr11:1353056–1355103 (-)6.921e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)3.544e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.596e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.596e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.449e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.083e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.925e-14
Glyma.16G119900 hypothetical protein NA 1Chr16:26773781–26777462 (+)1.523e-11
Glyma.16G120200 hypothetical protein AT4G35730:AT4G35730:Regulator of Vps4 activity in the MVB pathway protein 1Chr16:26823772–26828068 (+)2.473e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)5.21e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)5.21e-11
Glyma.17G258200 GASA29 gibberellin-regulated protein 29 NA 1Chr17:41222782–41223797 (-)4.901e-13
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)1.919e-13
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)2.532e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.872e-13