Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30266

Metabolite ID
P30266
Deionized mass
388.2076 Da
Average m/z
389.2134
Average RT
15.9904
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
60
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

60 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)4.734e-11
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)2.695e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)1.283e-12
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)3.891e-12
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)2.778e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.86e-11
Glyma.13G183400 hypothetical protein NA 2Chr13:29666942–29670201 (+)9.333e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)7.884e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)7.994e-11
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)4.734e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)5.349e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)2.695e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.541e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.713e-12
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)1.296e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)1.296e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)1.296e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.454e-13
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)1.651e-13
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)1.651e-13
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)4.543e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.438e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.484e-17
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.006e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.86e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.86e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)2.778e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.86e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.122e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)9.803e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)9.803e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.384e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.384e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.042e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.042e-13
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)8.948e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)2.503e-13
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)7.89e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.449e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.085e-14
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)1.3e-14
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)1.3e-14
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)8.324e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)8.393e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.028e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.734e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.734e-11
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 1Chr16:6914905–6920531 (+)8.553e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)9.76e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.283e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.013e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.013e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.279e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.279e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.186e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)7.994e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)9.085e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)2.53e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.765e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.155e-11