Overview Annotation GWAS Evidence Associated genes

P30242

Metabolite ID
P30242
Deionized mass
632.2296 Da
Average m/z
633.2381
Average RT
15.9828
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)7.515e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.38e-11
Glyma.04G176600 hypothetical protein AT1G74800:AT1G74800:Galactosyltransferase family protein 1Chr04:43967842–43971631 (-)4.913e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)9.027e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)1.566e-11
Glyma.06G091500 hypothetical protein NA 1Chr06:7175769–7178554 (-)1.685e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.354e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.748e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)7.203e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.014e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.95e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.951e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.909e-11