Overview Annotation GWAS Evidence Associated genes

P30240

Metabolite ID
P30240
Deionized mass
650.2470 Da
Average m/z
651.2523
Average RT
15.9823
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
36
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

36 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.839e-11
Glyma.06G301000 hypothetical protein NA 2Chr06:49001317–49005605 (+)2.763e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.704e-14
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 2Chr16:30652378–30659548 (+)1.94e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)3.318e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)1.139e-12
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)3.651e-11
Glyma.06G091500 hypothetical protein NA 1Chr06:7175769–7178554 (-)2.536e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.251e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.251e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.251e-13
Glyma.06G301100 hypothetical protein AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr06:49013527–49014231 (+)4.153e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.839e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.839e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.785e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.222e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.222e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.866e-11
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)5.9e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.721e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.813e-13
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.882e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.956e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.956e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)9.542e-14
Glyma.16G138400 hypothetical protein NA 1Chr16:29560913–29562163 (+)9.917e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.279e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.631e-13
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)3.329e-12
Glyma.17G250700 hypothetical protein AT1G75210:AT1G75210:HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase 1Chr17:40550521–40557680 (+)5.292e-11
Glyma.17G250800 hypothetical protein NA 1Chr17:40558554–40564000 (-)5.292e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)8.296e-11
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)8.295e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.324e-12
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)4.697e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.154e-13