Overview Annotation GWAS Evidence Associated genes

P30175

Metabolite ID
P30175
Deionized mass
524.2221 Da
Average m/z
525.2285
Average RT
15.9637
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)5.874e-11
Glyma.20G077300 hypothetical protein AT3G24230:AT3G24230:Pectate lyase family protein__AT4G13710:AT4G13710:Pectin lyase-like superfamily protein 1Chr20:27993600–27999492 (+)8.871e-11
Glyma.20G080600 hypothetical protein NA 1Chr20:30128487–30129839 (+)2.38e-11
Glyma.20G082500 hypothetical protein NA 1Chr20:31130807–31133107 (-)2.38e-11
Glyma.20G124000 hypothetical protein AT1G15130:AT1G15130:Endosomal targeting BRO1-like domain-containing protein 1Chr20:36650311–36658785 (+)1.122e-11