Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30078

Metabolite ID
P30078
Deionized mass
270.1800 Da
Average m/z
271.1880
Average RT
15.9345
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.904e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)1.206e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.531e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.791e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.325e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)6.115e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.065e-14
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.376e-14
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.065e-14
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.065e-14
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.376e-14
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)6.99e-13
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)1.031e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)2.282e-14
Glyma.14G044100 hypothetical protein AT5G62300:AT5G62300:Ribosomal protein S10p/S20e family protein 1Chr14:3347545–3348907 (+)3.095e-11
Glyma.14G045000 hypothetical protein AT5G20950:AT5G20950:Glycosyl hydrolase family protein 1Chr14:3430845–3435477 (-)1.342e-11
Glyma.14G045400 hypothetical protein NA 1Chr14:3463112–3465007 (+)8.129e-11
Glyma.14G045900 hypothetical protein AT1G76490:HMG1:hydroxy methylglutaryl CoA reductase 1 1Chr14:3496600–3500441 (+)4.689e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.904e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.909e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.203e-14
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.979e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)6.947e-11
Glyma.17G095900 hypothetical protein NA 1Chr17:7512456–7513872 (-)1.135e-11