Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30043

Metabolite ID
P30043
Deionized mass
752.2870 Da
Average m/z
753.2976
Average RT
15.9273
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)8.546e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.906e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.906e-13
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)2.175e-13
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)2.909e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)4.995e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.144e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.144e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)7.446e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.104e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)4.001e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.041e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.51e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.673e-13
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)2.112e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)3.573e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)9.322e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)1.217e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)1.504e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.353e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)3.687e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)3.122e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)4.317e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.878e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)2.045e-12
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)2.809e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.471e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.471e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.87e-16
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.87e-16
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.139e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.932e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.38e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.38e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.906e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.002e-13
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)5.967e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.559e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.318e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.84e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.318e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.318e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.349e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.274e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.424e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)3.012e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.187e-13
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)5.063e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.187e-13
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.175e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.628e-11
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)5.057e-11
Glyma.16G147900 hypothetical protein NA 1Chr16:30864919–30872425 (+)2.236e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)4.96e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.802e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.229e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.81e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.85e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.916e-14