Overview Annotation GWAS Evidence Associated genes

P29993

Metabolite ID
P29993
Deionized mass
872.3405 Da
Average m/z
873.3533
Average RT
15.9184
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)5.03e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)5.03e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.571e-11
Glyma.13G081100 hypothetical protein NA 1Chr13:18881427–18886462 (-)4.745e-13
Glyma.13G129600 hypothetical protein NA 1Chr13:24243834–24248528 (+)3.005e-12
Glyma.13G129800 hypothetical protein AT2G20230:AT2G20230:Tetraspanin family protein 1Chr13:24255740–24260637 (-)3.005e-12
Glyma.14G083200 hypothetical protein NA 1Chr14:7249145–7256947 (-)2.273e-15
Glyma.14G084200 hypothetical protein NA 1Chr14:7375402–7379417 (-)3.977e-15
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.784e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.784e-11
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)4.246e-11