Overview Annotation GWAS Evidence Associated genes

P29987

Metabolite ID
P29987
Deionized mass
775.4206 Da
Average m/z
776.4262
Average RT
15.9171
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.501e-11
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)3.281e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.501e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.543e-11
Glyma.03G028900 hypothetical protein AT3G60730:AT3G60730:Plant invertase/pectin methylesterase inhibitor superfamily 1Chr03:3148672–3152887 (-)1.837e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)2.62e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)2.62e-11
Glyma.08G123500 hypothetical protein NA 1Chr08:9494946–9505931 (-)7.723e-11
Glyma.13G053800 hypothetical protein NA 1Chr13:15110071–15112808 (+)7.059e-11
Glyma.14G044100 hypothetical protein AT5G62300:AT5G62300:Ribosomal protein S10p/S20e family protein 1Chr14:3347545–3348907 (+)4.029e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.208e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.26e-11