Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P29882

Metabolite ID
P29882
Deionized mass
605.1817 Da
Average m/z
606.1909
Average RT
15.8961
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
62
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

62 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.272e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)1.954e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)7.896e-14
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)7.315e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.781e-14
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)5.005e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)5.005e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)5.005e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.069e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.388e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)4.217e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)2.487e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.273e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.916e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.577e-16
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.451e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.234e-19
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.152e-19
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.733e-18
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)4.003e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.575e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)8.208e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)8.208e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)8.208e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)8.203e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.572e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.781e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.781e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.781e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.781e-14
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)8.273e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)7.54e-12
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)6.865e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.519e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.519e-12
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)6.873e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.992e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.113e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.061e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)5.004e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)5.004e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)5.005e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)5.005e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)5.005e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)8.636e-11
Glyma.11G019200 hypothetical protein AT4G23730:AT4G23730:Galactose mutarotase-like superfamily protein 1Chr11:1353056–1355103 (-)3.696e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)9.907e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)9.908e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)9.908e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.003e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.989e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)8.874e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.062e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)6.073e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.235e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.736e-12
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)4.205e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.565e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.023e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.76e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.76e-13
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)1.557e-11