Overview Annotation GWAS Evidence Associated genes

P29878

Metabolite ID
P29878
Deionized mass
626.2517 Da
Average m/z
627.2609
Average RT
15.8955
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 3Chr18:55076548–55086297 (+)2.149e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)1.487e-11
Glyma.08G150400 hypothetical protein NA 1Chr08:11565265–11571675 (+)4.193e-11
Glyma.15G233600 hypothetical protein NA 1Chr15:43971478–43972713 (+)2.72e-12
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 1Chr15:49447943–49451741 (+)3.559e-11
Glyma.15G262400 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein__AT1G79520:AT1G79520:Cation efflux family protein 1Chr15:49495728–49499550 (+)4.463e-11
Glyma.15G263000 hypothetical protein AT1G79480:AT1G79480:Carbohydrate-binding X8 domain superfamily protein 1Chr15:49582081–49584471 (+)2.728e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)6.896e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.083e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.669e-15
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)7.484e-11