Overview Annotation GWAS Evidence Associated genes

P29876

Metabolite ID
P29876
Deionized mass
400.2433 Da
Average m/z
401.2500
Average RT
15.8946
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G260600 hypothetical protein NA 2Chr13:36467412–36479638 (+)6.05e-11
Glyma.13G261000 hypothetical protein AT3G14570:GSL04:glucan synthase-like 4 2Chr13:36494874–36510778 (+)6.05e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)4.934e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.811e-12
Glyma.13G258300 hypothetical protein NA 1Chr13:36280581–36282092 (-)6.05e-11
Glyma.13G259200 hypothetical protein AT1G17140:ICR1:interactor of constitutive active rops 1__AT1G78430:RIP4:ROP interactive partner 2 1Chr13:36358298–36364468 (+)6.05e-11
Glyma.13G259700 hypothetical protein AT1G17110:UBP15:ubiquitin-specific protease 15 1Chr13:36413286–36421644 (-)6.05e-11
Glyma.13G260700 hypothetical protein NA 1Chr13:36468910–36472973 (-)6.05e-11
Glyma.13G260900 hypothetical protein NA 1Chr13:36493960–36494759 (+)6.05e-11
Glyma.13G261100 hypothetical protein NA 1Chr13:36511671–36513583 (+)6.05e-11
Glyma.14G205100 hypothetical protein NA 1Chr14:47020646–47026852 (+)6.158e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.892e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)4.898e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)9.165e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.183e-11
Glyma.18G179200 hypothetical protein NA 1Chr18:43222934–43228759 (-)3.36e-11