Overview Annotation GWAS Evidence Associated genes

P29740

Metabolite ID
P29740
Deionized mass
302.1717 Da
Average m/z
303.1778
Average RT
15.8554
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G239800 hypothetical protein AT4G39850:ABCD1:peroxisomal ABC transporter 1 2Chr11:33424880–33439567 (+)1.862e-18
Glyma.11G241200 hypothetical protein AT5G10320:AT5G10320:ATP synthase subunit B 2Chr11:33537120–33542455 (-)3.291e-40
Glyma.05G008500 hypothetical protein NA 1Chr05:778242–783891 (+)1.834e-11
Glyma.05G142000 hypothetical protein NA 1Chr05:33530449–33539474 (-)4.877e-11
Glyma.11G238500 hypothetical protein NA 1Chr11:33290540–33298235 (-)3.291e-40
Glyma.11G240300 hypothetical protein AT4G39890:RABH1c:RAB GTPase homolog H1C__AT5G64990:RABH1a:RAB GTPase homolog H1A 1Chr11:33465342–33469812 (+)2.982e-13
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)3.291e-40
Glyma.11G240800 hypothetical protein NA 1Chr11:33499010–33499264 (+)4.784e-14
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)3.291e-40
Glyma.16G168100 hypothetical protein NA 1Chr16:32801811–32810413 (-)8.057e-15
Glyma.16G168500 hypothetical protein NA 1Chr16:32844099–32848267 (+)4.877e-11
Glyma.20G173000 hypothetical protein AT1G71830:SERK1:somatic embryosis receptor-like kinase 1__AT1G34210:SERK2:somatic embryosis receptor-like kinase 2 1Chr20:41054564–41061849 (+)9.64e-12
Glyma.20G173200 hypothetical protein AT1G34260:FAB1D:FORMS APLOID AND BINUCLEATE CELLS 1A 1Chr20:41087356–41097905 (+)9.64e-12
Glyma.20G173400 hypothetical protein AT1G34270:AT1G34270:Exostosin family protein 1Chr20:41104156–41107851 (-)9.64e-12