Overview Annotation GWAS Evidence Associated genes

P29733

Metabolite ID
P29733
Deionized mass
502.1663 Da
Average m/z
503.1716
Average RT
15.8546
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.037e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.836e-13
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)1.104e-11
Glyma.03G019300 hypothetical protein NA 1Chr03:1952796–1975003 (+)2.097e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.297e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.28e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.518e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.518e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.518e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.619e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.619e-11
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)2.035e-12
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)1.804e-11
Glyma.15G257500 hypothetical protein NA 1Chr15:48713244–48717192 (+)2.422e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.036e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.037e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.037e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.037e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.183e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.967e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.863e-13
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)2.267e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.423e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.804e-13