Overview Annotation GWAS Evidence Associated genes

P29727

Metabolite ID
P29727
Deionized mass
896.3637 Da
Average m/z
897.3771
Average RT
15.8536
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G218800 hypothetical protein AT1G63430:AT1G63430:Leucine-rich repeat protein kinase family protein 1Chr01:54860809–54866642 (+)8.956e-12
Glyma.01G219700 hypothetical protein AT3G52905:AT3G52905:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 1Chr01:54908697–54911774 (-)8.956e-12
Glyma.01G220100 hypothetical protein NA 1Chr01:54947015–54948375 (+)8.956e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.735e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)5.199e-11
Glyma.15G172100 hypothetical protein NA 1Chr15:15693700–15701873 (-)8.68e-11