Overview Annotation GWAS Evidence Associated genes

P29683

Metabolite ID
P29683
Deionized mass
856.4200 Da
Average m/z
857.4268
Average RT
15.8430
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.247e-13
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)5.93e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.993e-11
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)6.511e-11
Glyma.15G261500 hypothetical protein NA 1Chr15:49389257–49390129 (-)4.145e-11
Glyma.15G261600 hypothetical protein AT1G16280:RH36:RNA helicase 36 1Chr15:49391698–49397734 (-)4.145e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)3.123e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.467e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)4.3e-15
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)1.24e-13
Glyma.19G027200 hypothetical protein AT5G15400:AT5G15400:U-box domain-containing protein 1Chr19:3392784–3401129 (-)2.727e-13
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)3.259e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.501e-11