Overview Annotation GWAS Evidence Associated genes

P29529

Metabolite ID
P29529
Deionized mass
460.1934 Da
Average m/z
461.1986
Average RT
15.8146
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G012200 hypothetical protein NA 1Chr05:1109904–1113717 (-)3.556e-16
Glyma.13G168300 hypothetical protein AT5G20110:AT5G20110:Dynein light chain type 1 family protein 1Chr13:28265646–28268213 (+)2.424e-13
Glyma.16G215600 hypothetical protein AT3G17660:AGD15:ARF-GAP domain 15 1Chr16:37292073–37296192 (+)4.854e-16
Glyma.19G021700 hypothetical protein AT3G55160:AT3G55160:thyroid adenoma-associated-like protein 1Chr19:2404294–2414947 (+)1.534e-13