Overview Annotation GWAS Evidence Associated genes

P29501

Metabolite ID
P29501
Deionized mass
323.1238 Da
Average m/z
324.1307
Average RT
15.8078
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.541e-14
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)2.251e-12
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)7.086e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.476e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.177e-12