Overview Annotation GWAS Evidence Associated genes

P29454

Metabolite ID
P29454
Deionized mass
185.1416 Da
Average m/z
186.1476
Average RT
15.7985
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.489e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.574e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.808e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.535e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)5.526e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.676e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.676e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.676e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.676e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.976e-12
Glyma.19G137700 hypothetical protein NA 1Chr19:39904075–39916887 (+)9.432e-12
Glyma.20G223300 hypothetical protein AT1G09770:CDC5:cell division cycle 5 1Chr20:45791239–45803369 (-)9.366e-11