Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P29411

Metabolite ID
P29411
Deionized mass
788.3773 Da
Average m/z
789.3807
Average RT
15.7866
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)9.143e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)8.603e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.647e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.292e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.758e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)7.912e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)7.912e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.799e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.456e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.968e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.968e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.196e-11
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)5.506e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.337e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)8.603e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.332e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.256e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.332e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.332e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)5.604e-11
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)1.728e-11
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)5.975e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)2.142e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)6.12e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.739e-11