Overview Annotation GWAS Evidence Associated genes

P29348

Metabolite ID
P29348
Deionized mass
619.8052 Da
Average m/z
620.8095
Average RT
15.7638
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)1.777e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.639e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)9.032e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.226e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.656e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.928e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.928e-11
Glyma.06G291300 hypothetical protein NA 1Chr06:48016841–48019943 (+)4.001e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)7.874e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)7.874e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)7.875e-12
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)7.723e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.326e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.639e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.918e-12
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)7.772e-14
Glyma.18G220200 hypothetical protein AT2G38650:GAUT7:galacturonosyltransferase 7 1Chr18:50714270–50723555 (-)1.65e-12
Glyma.18G220300 hypothetical protein NA 1Chr18:50719690–50720509 (-)1.65e-12