Overview Annotation GWAS Evidence Associated genes

P29328

Metabolite ID
P29328
Deionized mass
484.1722 Da
Average m/z
485.1792
Average RT
15.7578
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G002800 hypothetical protein AT4G24290:AT4G24290:MAC/Perforin domain-containing protein 4Chr16:144387–154780 (+)4.5e-12
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)2.28e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)7.402e-11
Glyma.08G143700 hypothetical protein NA 1Chr08:10963025–10963671 (+)4.425e-11
Glyma.08G143900 hypothetical protein AT1G20580:AT1G20580:Small nuclear ribonucleoprotein family protein 1Chr08:10973479–10976014 (-)2.268e-11
Glyma.08G145300 hypothetical protein AT5G64750:ABR1:Integrase-type DNA-binding superfamily protein 1Chr08:11041449–11043230 (-)2.268e-11
Glyma.08G145700 hypothetical protein AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein 1Chr08:11083230–11086950 (-)3.519e-12
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 1Chr08:11092669–11096142 (-)3.519e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)8.657e-11
Glyma.16G003100 hypothetical protein AT1G09800:AT1G09800:Pseudouridine synthase family protein 1Chr16:169457–172345 (-)4.5e-12
Glyma.16G003300 hypothetical protein AT5G49960:AT5G49960:ion channel protein 1Chr16:183599–192001 (+)2.037e-11
Glyma.16G003500 GLYI-22 putative lactoylglutathione lyase NA 1Chr16:194687–196274 (-)1.808e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)1.348e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)5.099e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.099e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)3.891e-11