Overview Annotation GWAS Evidence Associated genes

P29260

Metabolite ID
P29260
Deionized mass
852.3752 Da
Average m/z
853.3825
Average RT
15.7408
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
30
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

30 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 2Chr08:8296196–8307328 (-)3.644e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)5.98e-14
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.35e-17
Glyma.03G016900 hypothetical protein NA 1Chr03:1702419–1707451 (+)8.066e-12
Glyma.03G017000 hypothetical protein AT3G61060:PP2-A13:phloem protein 2-A13 1Chr03:1716204–1719596 (+)2.188e-11
Glyma.03G017500 hypothetical protein NA 1Chr03:1761083–1762800 (+)4.817e-11
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)9.818e-11
Glyma.03G035800 hypothetical protein NA 1Chr03:4317466–4321009 (+)7.988e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)2.716e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)6.629e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.843e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.262e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.648e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.59e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)7.538e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.771e-11
Glyma.08G107700 RHG4 receptor-like kinase RHG4 NA 1Chr08:8284689–8288765 (+)6.552e-11
Glyma.08G108400 hypothetical protein NA 1Chr08:8326311–8330206 (+)3.644e-12
Glyma.08G303300 hypothetical protein NA 1Chr08:42134782–42139026 (+)4.36e-11
Glyma.08G303400 hypothetical protein NA 1Chr08:42139097–42147365 (+)4.36e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.812e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)3.917e-13
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)7.145e-16
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.955e-15
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.955e-15
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.35e-17
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.527e-15
Glyma.18G263300 hypothetical protein AT5G39420:cdc2cAt:CDC2C 1Chr18:54865827–54872924 (-)9.834e-12
Glyma.18G265900 hypothetical protein NA 1Chr18:55040041–55042737 (-)3.29e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)7.08e-12