Overview Annotation GWAS Evidence Associated genes

P29232

Metabolite ID
P29232
Deionized mass
586.1661 Da
Average m/z
587.1727
Average RT
15.7319
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G135000 hypothetical protein AT3G50910:AT3G50910:netrin receptor DCC 2Chr16:29248080–29253429 (-)4.162e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.998e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)8.179e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)1.736e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)2.485e-12
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)2.485e-12
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)2.485e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.531e-12
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)5.999e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)5.999e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)3.028e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.212e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.377e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.377e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.377e-11
Glyma.14G045900 hypothetical protein AT1G76490:HMG1:hydroxy methylglutaryl CoA reductase 1 1Chr14:3496600–3500441 (+)2.363e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)6.086e-11
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)1.015e-11
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)1.015e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)8.442e-11
Glyma.16G137800 hypothetical protein NA 1Chr16:29480352–29487400 (-)1.763e-11
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)1.392e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)6.372e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)8.808e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.998e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)7.394e-11
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 1Chr19:860974–865476 (+)3.39e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.622e-11