Overview Annotation GWAS Evidence Associated genes

P29175

Metabolite ID
P29175
Deionized mass
945.4812 Da
Average m/z
946.4822
Average RT
15.7169
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.114e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.114e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.016e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.807e-13
Glyma.08G127900 hypothetical protein AT1G10780:AT1G10780:F-box/RNI-like superfamily protein 1Chr08:9860865–9863694 (-)7.146e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.467e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.467e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.991e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.991e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)9.037e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.187e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.187e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.114e-13
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.114e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.135e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.875e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)3.123e-11