Overview Annotation GWAS Evidence Associated genes

P29126

Metabolite ID
P29126
Deionized mass
660.2318 Da
Average m/z
661.2337
Average RT
15.7005
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G135000 hypothetical protein AT3G50910:AT3G50910:netrin receptor DCC 2Chr16:29248080–29253429 (-)1.363e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.627e-12
Glyma.04G107900 hypothetical protein AT3G53990:AT3G53990:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr04:11421366–11422972 (-)4.14e-13
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)9.985e-12
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)5.756e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.39e-13